Gene Expression Commons

Citations

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Growth hormone receptor signaling is dispensable for HSC function and aging.
Stewart MH, Gutierrez-Martinez P, Beerman I, Garrison B, Gallagher EJ, LeRoith D, Rossi DJ.
Blood. 2014 Nov 13;124(20):3076-80. doi: 10.1182/blood-2014-05-575308
PMID: 25274507
Global transcriptional profiling reveals distinct functions of thymic stromal subsets and age-related changes during thymic involution.
Ki S, Park D, Selden HJ, Seita J, Chung H, Kim J, Iyer VR, Ehrlich LI.
Cell Rep. 2014 Oct 9;9(1):402-15. doi: 10.1016/j.celrep.2014.08.070
PMID: 25284794
Integrated multi-cohort transcriptional meta-analysis of neurodegenerative diseases.
Li MD, Burns TC, Morgan AA, Khatri P.
Acta Neuropathol Commun. 2014 Sep 4;2:93. doi: 10.1186/s40478-014-0093-y
PMID: 25187168
A trial of alemtuzumab adjunctive therapy in allogeneic hematopoietic cell transplantation with minimal conditioning for severe combined immunodeficiency.
Dvorak CC, Horn BN, Puck JM, Adams S, Veys P, Czechowicz A, Cowan MJ.
Pediatr Transplant. 2014 Sep;18(6):609-16. doi: 10.1111/petr.12310
PMID: 24977928
The Rothmund-Thomson syndrome helicase RECQL4 is essential for hematopoiesis.
Smeets MF, DeLuca E, Wall M, Quach JM, Chalk AM, Deans AJ, Heierhorst J, Purton LE, Izon DJ, Walkley CR.
J Clin Invest. 2014 Aug;124(8):3551-65. doi: 10.1172/JCI75334
PMID: 24960165
Quiescent hematopoietic stem cells accumulate DNA damage during aging that is repaired upon entry into cell cycle.
Beerman I, Seita J, Inlay MA, Weissman IL, Rossi DJ.
Cell Stem Cell. 2014 Jul 3;15(1):37-50. doi: 10.1016/j.stem.2014.04.016
PMID: 24813857
StemCellNet: an interactive platform for network-oriented investigations in stem cell biology.
Pinto JP, Reddy Kalathur RK, Machado RS, Xavier JM, Bragança J, Futschik ME.
Nucleic Acids Res. 2014 Jul;42(Web Server issue):W154-60. doi: 10.1093/nar/gku455
PMID: 24852251
Fgd5 identifies hematopoietic stem cells in the murine bone marrow.
Gazit R, Mandal PK, Ebina W, Ben-Zvi A, Nombela-Arrieta C, Silberstein LE, Rossi DJ.
J Exp Med. 2014 Jun 30;211(7):1315-31. doi: 10.1084/jem.20130428
PMID: 24958848
Annexin A8 controls leukocyte recruitment to activated endothelial cells via cell surface delivery of CD63.
Poeter M, Brandherm I, Rossaint J, Rosso G, Shahin V, Skryabin BV, Zarbock A, Gerke V, Rescher U.
Nat Commun. 2014 Apr 28;5:3738. doi: 10.1038/ncomms4738
PMID: 24769558
YuGene: a simple approach to scale gene expression data derived from different platforms for integrated analyses.
Lê Cao KA, Rohart F, McHugh L, Korn O, Wells CA.
Genomics. 2014 Apr;103(4):239-51. doi: 10.1016/j.ygeno.2014.03.001
PMID: 24667244
The SKI proto-oncogene enhances the in vivo repopulation of hematopoietic stem cells and causes myeloproliferative disease.
Singbrant S, Wall M, Moody J, Karlsson G, Chalk AM, Liddicoat B, Russell MR, Walkley CR, Karlsson S.
Haematologica. 2014 Apr;99(4):647-55. doi: 10.3324/haematol.2013.093971
PMID: 24415629
Alveolar progenitor and stem cells in lung development, renewal and cancer.
Desai TJ, Brownfield DG, Krasnow MA.
Nature. 2014 Mar 13;507(7491):190-4. doi: 10.1038/nature12930
PMID: 24499815
p53 activity is selectively licensed in the Drosophila stem cell compartment.
Wylie A, Lu WJ, D'Brot A, Buszczak M, Abrams JM.
Elife. 2014 Mar 11;3:e01530. doi: 10.7554/eLife.01530
PMID: 24618896
A complex regulatory network coordinating cell cycles during C. elegans development is revealed by a genome-wide RNAi screen.
Roy SH, Tobin DV, Memar N, Beltz E, Holmen J, Clayton JE, Chiu DJ, Young LD, Green TH, Lubin I, Liu Y, Conradt B, Saito RM.
G3 (Bethesda). 2014 Feb 28;4(5):795-804. doi: 10.1534/g3.114.010546
PMID: 24584095
Conserved two-step regulatory mechanism of human epithelial differentiation.
Rane JK, Droop AP, Pellacani D, Polson ES, Simms MS, Collins AT, Caves LS, Maitland NJ.
Stem Cell Reports. 2014 Feb 6;2(2):180-8. doi: 10.1016/j.stemcr.2014.01.001
PMID: 24527392
The bone marrow niche for haematopoietic stem cells.
Morrison SJ, Scadden DT.
Nature. 2014 Jan 16;505(7483):327-34. doi: 10.1038/nature12984
PMID: 24429631
Transgene expression in various organs post BM-HSC transplantation.
Wang N, Rajasekaran N, Hou T, Mellins ED.
Stem Cell Res. 2014 Jan;12(1):209-21. doi: 10.1016/j.scr.2013.10.010
PMID: 24270160
TSPAN33 is a novel marker of activated and malignant B cells.
Luu VP, Hevezi P, Vences-Catalan F, Maravillas-Montero JL, White CA, Casali P, Llorente L, Jakez-Ocampo J, Lima G, Vilches-Cisneros N, Flores-Gutiérrez JP, Santos-Argumedo L, Zlotnik A.
Clin Immunol. 2013 Dec;149(3):388-99. doi: 10.1016/j.clim.2013.08.005
PMID: 24211713
HSC-explorer: a curated database for hematopoietic stem cells.
Montrone C, Kokkaliaris KD, Loeffler D, Lechner M, Kastenmüller G, Schroeder T, Ruepp A.
PLoS One. 2013;8(7):e70348. doi: 10.1371/journal.pone.0070348
PMID: 23936191
Pathprinting: An integrative approach to understand the functional basis of disease.
Altschuler GM, Hofmann O, Kalatskaya I, Payne R, Ho Sui SJ, Saxena U, Krivtsov AV, Armstrong SA, Cai T, Stein L, Hide WA.
Genome Med. 2013 Jul 26;5(7):68. doi: 10.1186/gm472
PMID: 23890051
An MLL-dependent network sustains hematopoiesis.
Artinger EL, Mishra BP, Zaffuto KM, Li BE, Chung EK, Moore AW, Chen Y, Cheng C, Ernst P.
Proc Natl Acad Sci U S A. 2013 Jul 16;110(29):12000-5. doi: 10.1073/pnas.1301278110
PMID: 23744037
The genome sequence of the colonial chordate, Botryllus schlosseri.
Voskoboynik A, Neff NF, Sahoo D, Newman AM, Pushkarev D, Koh W, Passarelli B, Fan HC, Mantalas GL, Palmeri KJ, Ishizuka KJ, Gissi C, Griggio F, Ben-Shlomo R, Corey DM, Penland L, White RA 3rd, Weissman IL, Quake SR.
Elife. 2013 Jul 2;2:e00569. doi: 10.7554/eLife.00569
PMID: 23840927
Hard-wired heterogeneity in blood stem cells revealed using a dynamic regulatory network model.
Bonzanni N, Garg A, Feenstra KA, Schütte J, Kinston S, Miranda-Saavedra D, Heringa J, Xenarios I, Göttgens B.
Bioinformatics. 2013 Jul 1;29(13):i80-8. doi: 10.1093/bioinformatics/btt243
PMID: 23813012
The BCL11A transcription factor directly activates RAG gene expression and V(D)J recombination.
Lee BS, Dekker JD, Lee BK, Iyer VR, Sleckman BP, Shaffer AL 3rd, Ippolito GC, Tucker PW.
Mol Cell Biol. 2013 May;33(9):1768-81. doi: 10.1128/MCB.00987-12
PMID: 23438597
Proliferation-dependent alterations of the DNA methylation landscape underlie hematopoietic stem cell aging.
Beerman I, Bock C, Garrison BS, Smith ZD, Gu H, Meissner A, Rossi DJ.
Cell Stem Cell. 2013 Apr 4;12(4):413-25. doi: 10.1016/j.stem.2013.01.017
PMID: 23415915