Gene Expression Commons

Citations

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Lineage tracing of murine adult hematopoietic stem cells reveals active contribution to steady-state hematopoiesis.
Chapple RH, Tseng YJ, Hu T, Kitano A, Takeichi M, Hoegenauer KA, Nakada D.
Blood Adv. 2018 Jun 12;2(11):1220-1228. doi: 10.1182/bloodadvances.2018016295
PMID: 29848758
PU.1 Is Required for the Developmental Progression of Multipotent Progenitors to Common Lymphoid Progenitors.
Pang SHM, de Graaf CA, Hilton DJ, Huntington ND, Carotta S, Wu L, Nutt SL.
Front Immunol. 2018;9:1264. doi: 10.3389/fimmu.2018.01264
PMID: 29942304
The transcription factor Zfp90 regulates the self-renewal and differentiation of hematopoietic stem cells.
Liu T, Kong WX, Tang XY, Xu M, Wang QH, Zhang B, Hu LD, Chen H.
Cell Death Dis. 2018 Jun 7;9(6):677. doi: 10.1038/s41419-018-0721-8
PMID: 29880802
Hematopoietic Stem Cells but Not Multipotent Progenitors Drive Erythropoiesis during Chronic Erythroid Stress in EPO Transgenic Mice.
Singh RP, Grinenko T, Ramasz B, Franke K, Lesche M, Dahl A, Gassmann M, Chavakis T, Henry I, Wielockx B.
Stem Cell Reports. 2018 Jun 5;10(6):1908-1919. doi: 10.1016/j.stemcr.2018.04.012
PMID: 29754961
The characteristics of vessel lining cells in normal spleens and their role in the pathobiology of myelofibrosis.
Qiu J, Salama ME, Hu CS, Li Y, Wang X, Hoffman R.
Blood Adv. 2018 May 22;2(10):1130-1145. doi: 10.1182/bloodadvances.2017015073
PMID: 29776986
Diminished apoptotic priming and ATM signalling confer a survival advantage onto aged haematopoietic stem cells in response to DNA damage.
Gutierrez-Martinez P, Hogdal L, Nagai M, Kruta M, Singh R, Sarosiek K, Nussenzweig A, Beerman I, Letai A, Rossi DJ.
Nat Cell Biol. 2018 Apr;20(4):413-421. doi: 10.1038/s41556-018-0054-y
PMID: 29531308
Genetic background influences susceptibility to chemotherapy-induced hematotoxicity.
Gatti DM, Weber SN, Goodwin NC, Lammert F, Churchill GA.
Pharmacogenomics J. 2018 Apr;18(2):319-330. doi: 10.1038/tpj.2017.23
PMID: 28607509
The Chromatin Remodeler BPTF Activates a Stemness Gene-Expression Program Essential for the Maintenance of Adult Hematopoietic Stem Cells.
Xu B, Cai L, Butler JM, Chen D, Lu X, Allison DF, Lu R, Rafii S, Parker JS, Zheng D, Wang GG.
Stem Cell Reports. 2018 Mar 13;10(3):675-683. doi: 10.1016/j.stemcr.2018.01.020
PMID: 29456179
The Pathway Coexpression Network: Revealing pathway relationships.
Pita-Juárez Y, Altschuler G, Kariotis S, Wei W, Koler K, Green C, Tanzi RE, Hide W.
PLoS Comput Biol. 2018 Mar;14(3):e1006042. doi: 10.1371/journal.pcbi.1006042
PMID: 29554099
A roadmap towards personalized immunology.
Delhalle S, Bode SFN, Balling R, Ollert M, He FQ.
NPJ Syst Biol Appl. 2018;4:9. doi: 10.1038/s41540-017-0045-9
PMID: 29423275
Comparative analysis of gene expression identifies distinct molecular signatures of bone marrow- and periosteal-skeletal stem/progenitor cells.
Deveza L, Ortinau L, Lei K, Park D.
PLoS One. 2018;13(1):e0190909. doi: 10.1371/journal.pone.0190909
PMID: 29342188
StemMapper: a curated gene expression database for stem cell lineage analysis.
Pinto JP, Machado RSR, Magno R, Oliveira DV, Machado S, Andrade RP, Bragança J, Duarte I, Futschik ME.
Nucleic Acids Res. 2018 Jan 4;46(D1):D788-D793. doi: 10.1093/nar/gkx921
PMID: 29045725
A novel prospective isolation of murine fetal liver progenitors to study in utero hematopoietic defects.
Draper JE, Sroczynska P, Fadlullah MZH, Patel R, Newton G, Breitwieser W, Kouskoff V, Lacaud G.
PLoS Genet. 2018 Jan;14(1):e1007127. doi: 10.1371/journal.pgen.1007127
PMID: 29300724
Corrected and Republished from: BCL11A Is a Critical Component of a Transcriptional Network That Activates RAG Expression and V(D)J Recombination.
Lee BS, Lee BK, Iyer VR, Sleckman BP, Shaffer AL 3rd, Ippolito GC, Tucker HO, Dekker JD.
Mol Cell Biol. 2018 Jan 1;38(1). pii: e00362-17. doi: 10.1128/MCB.00362-17
PMID: 29038163
A novel approach for human whole transcriptome analysis based on absolute gene expression of microarray data.
Bikel S, Jacobo-Albavera L, Sánchez-Muñoz F, Cornejo-Granados F, Canizales-Quinteros S, Soberón X, Sotelo-Mundo RR, Del Río-Navarro BE, Mendoza-Vargas A, Sánchez F, Ochoa-Leyva A.
PeerJ. 2017;5:e4133. doi: 10.7717/peerj.4133
PMID: 29230367
ARID5B as a critical downstream target of the TAL1 complex that activates the oncogenic transcriptional program and promotes T-cell leukemogenesis.
Leong WZ, Tan SH, Ngoc PCT, Amanda S, Yam AWY, Liau WS, Gong Z, Lawton LN, Tenen DG, Sanda T.
Genes Dev. 2017 Dec 1;31(23-24):2343-2360. doi: 10.1101/gad.302646.117
PMID: 29326336
CCR7 Modulates the Generation of Thymic Regulatory T Cells by Altering the Composition of the Thymic Dendritic Cell Compartment.
Hu Z, Li Y, Van Nieuwenhuijze A, Selden HJ, Jarrett AM, Sorace AG, Yankeelov TE, Liston A, Ehrlich LIR.
Cell Rep. 2017 Oct 3;21(1):168-180. doi: 10.1016/j.celrep.2017.09.016
PMID: 28978470
APOBEC signature mutation generates an oncogenic enhancer that drives LMO1 expression in T-ALL.
Li Z, Abraham BJ, Berezovskaya A, Farah N, Liu Y, Leon T, Fielding A, Tan SH, Sanda T, Weintraub AS, Li B, Shen S, Zhang J, Mansour MR, Young RA, Look AT.
Leukemia. 2017 Oct;31(10):2057-2064. doi: 10.1038/leu.2017.75
PMID: 28260788
Ascorbate regulates haematopoietic stem cell function and leukaemogenesis.
Agathocleous M, Meacham CE, Burgess RJ, Piskounova E, Zhao Z, Crane GM, Cowin BL, Bruner E, Murphy MM, Chen W, Spangrude GJ, Hu Z, DeBerardinis RJ, Morrison SJ.
Nature. 2017 Sep 28;549(7673):476-481. doi: 10.1038/nature23876
PMID: 28825709
PRKCH regulates hematopoietic stem cell function and predicts poor prognosis in acute myeloid leukemia.
Porter SN, Magee JA.
Exp Hematol. 2017 Sep;53:43-47. doi: 10.1016/j.exphem.2017.05.006
PMID: 28596089
The stem cell regulator PEDF is dispensable for maintenance and function of hematopoietic stem cells.
Rörby E, Billing M, Dahl M, Warsi S, Andradottir S, Miharada K, Siva K, Jönsson JI, Blank U, Karlsson G, Karlsson S.
Sci Rep. 2017 Aug 31;7(1):10134. doi: 10.1038/s41598-017-09452-2
PMID: 28860613
The miR-106a~363<sup>Xpcl1</sup> miRNA cluster induces murine T cell lymphoma despite transcriptional activation of the p27<sup>Kip1</sup> cell cycle inhibitor.
Kuppers DA, Schmitt TM, Hwang HC, Samraj L, Clurman BE, Fero ML.
Oncotarget. 2017 Aug 1;8(31):50680-50691. doi: 10.18632/oncotarget.16932
PMID: 28881594
Aberrant activation of the GIMAP enhancer by oncogenic transcription factors in T-cell acute lymphoblastic leukemia.
Liau WS, Tan SH, Ngoc PCT, Wang CQ, Tergaonkar V, Feng H, Gong Z, Osato M, Look AT, Sanda T.
Leukemia. 2017 Aug;31(8):1798-1807. doi: 10.1038/leu.2016.392
PMID: 28028313
Essential role of FBXL5-mediated cellular iron homeostasis in maintenance of hematopoietic stem cells.
Muto Y, Nishiyama M, Nita A, Moroishi T, Nakayama KI.
Nat Commun. 2017 Jul 17;8:16114. doi: 10.1038/ncomms16114
PMID: 28714470
Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics.
Sin MLY, Mach KE, Sinha R, Wu F, Trivedi DR, Altobelli E, Jensen KC, Sahoo D, Lu Y, Liao JC.
Clin Cancer Res. 2017 Jul 15;23(14):3700-3710. doi: 10.1158/1078-0432.CCR-16-2610
PMID: 28193625